| |
|
| Contact: |
Jitendra Khurana |
| Organization: |
University of Delhi |
| Website: |
http://genomeindia.org/DPMB/index.htm |
| Source: |
Jain, M., Kaur, N., Garg, R., Thakur, J.K., Tyagi, A.K., and Khurana, J.P. (2006) Strucutre and expression analysis of early auxin responsive Aux/IAA gene family in rice (Oryza sativa). Funct Integ Genomics 6:47-59. |
| Criteria: |
These genes were found via BLAST analysis of annotated genes in KOME, NCBI, and TIGR. |
| |
|
LOC_Os01g08320 |
| Gene Name: |
OsIAA1 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP002903 |
| Comment: |
AK109373
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os01g09450 |
| Gene Name: |
OsIAA2 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA2 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP002743 |
| Mutant Line/Info: |
NF4870_0_703_1A |
| Comment: |
AK100314
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os01g13030 |
| Gene Name: |
OsIAA3 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA3 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP001859 |
| Comment: |
AK104654
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os01g18360 |
| Gene Name: |
OsIAA4 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA4 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP002070 |
| Comment: |
AK103865
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os01g48444 |
| Gene Name: |
OsIAA5 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA5 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP003374 |
| Comment: |
AK106121
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os01g53880 |
| Gene Name: |
OsIAA6 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA6 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP003768 |
| Comment: |
AK068600
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g13520 |
| Gene Name: |
OsIAA7 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA7 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP005756 |
| Comment: |
AK121870
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g49160 |
| Gene Name: |
OsIAA8 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA8 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP005113 |
| Comment: |
AK066518
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g56120 |
| Gene Name: |
OsIAA9 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP004240 |
| Comment: |
AK073365
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g57250 |
| Gene Name: |
OsIAA10 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA10 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP005111 |
| Comment: |
AK069892
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g43400 |
| Gene Name: |
OsIAA11 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA11 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AC145379 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g43410 |
| Gene Name: |
OsIAA12 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AC145379 |
| Comment: |
AK073044
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g53150 |
| Gene Name: |
OsIAA13 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA13 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AC096855 |
| Comment: |
AK059838
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g58350 |
| Gene Name: |
OsIAA14 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA14 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AC093713 |
| Comment: |
AK059619
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os05g08570 |
| Gene Name: |
OsIAA15 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA15 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AC144738 |
| Comment: |
AK100080
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os05g09480 |
| Gene Name: |
OsIAA16 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AC093954 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os05g14180 |
| Gene Name: |
OsIAA17 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA17 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AC145477 |
| Comment: |
AK106192
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os05g44810 |
| Gene Name: |
OsIAA18 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA18 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AC144740 |
| Comment: |
AK071192
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os05g48590 |
| Gene Name: |
OsIAA19 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA19 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AC144735 |
| Comment: |
AK109363
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os06g07040 |
| Gene Name: |
OsIAA20 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AB023482 |
| Comment: |
AK102541
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os06g22870 |
| Gene Name: |
OsIAA21 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA21 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP004784 |
| Comment: |
AK121989
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os06g24850 |
| Gene Name: |
OsIAA22 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA22 - Auxin-responsive Aux/IAA gene family member |
| GenBank Genomic Acc: |
AP003574 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os06g39590 |
| Gene Name: |
OsIAA23 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP004236 |
| Comment: |
AK069376
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os07g08460 |
| Gene Name: |
OsIAA24 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA24 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP003835 |
| Comment: |
AK103483
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os08g01780 |
| Gene Name: |
OsIAA25 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA25 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP004584 |
| Mutant Line/Info: |
T03552T, NC0107_0_403_1A, NF6834_0_702_1A |
| Comment: |
AK068232
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os09g35870 |
| Gene Name: |
OsIAA26 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA26 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AP005681 |
| Comment: |
AK111128
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g11410 |
| Gene Name: |
OsIAA27 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AC123524 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g11420 |
| Gene Name: |
OsIAA28 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA28 - Auxin-responsive Aux/IAA gene family member |
| GenBank Genomic Acc: |
AC123524 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g11430 |
| Gene Name: |
OsIAA29 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA29 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AC123524 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os12g40890 |
| Gene Name: |
OsIAA30 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AL837528 |
| Comment: |
AK068213
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os12g40900 |
| Gene Name: |
OsIAA31 |
| Gene Description: |
Auxin-responsive Aux/IAA gene family member
|
| MSU Annotation: |
OsIAA31 - Auxin-responsive Aux/IAA gene family member, expressed |
| GenBank Genomic Acc: |
AL837528 |
| Comment: |
AK073361
|
| Structural Annotation: |
|
|
|
| |
