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| Superfamily: |
F-box proteins |
| Contact: |
Jitendra Khurana |
| Organization: |
University of Delhi |
| Website: |
http://genomeindia.org/DPMB/index.htm |
| Source: |
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK,
Khurana JP (2007) F-box proteins in rice. Genome-wide analysis, classification, temporal and
spatial gene expression during panicle and seed development, and regulation by
light and abiotic stress. Plant Physiology 143(4):1467-83 |
| Criteria: |
BLAST search using the Hidden Markov Model (HMM) profile of F-box domain (PF00646) followed by domain analysis using SMART and PFam with an E-value cut off of less than 1.0. The identified 687 proteins were further classified into 10 subfamilies based upon their domain organization as indicated by the subfamily name. |
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LOC_Os01g39670 |
| Gene Name: |
OsFBD1 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD1 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP002908 |
| Structural Annotation: |
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LOC_Os01g41260 |
| Gene Name: |
OsFBD2 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD2 - F-box and FBD domain containing protein |
| GenBank Genomic Acc: |
AP003253 |
| Structural Annotation: |
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LOC_Os01g41270 |
| Gene Name: |
OsFBD3 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD3 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP003253 |
| Structural Annotation: |
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LOC_Os01g41280 |
| Gene Name: |
OsFBD4 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD4 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP003253 |
| Structural Annotation: |
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LOC_Os01g41290 |
| Gene Name: |
OsFBD5 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD5 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP003253 |
| Structural Annotation: |
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LOC_Os02g08160 |
| Gene Name: |
OsFBD6 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD6 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP004838 |
| Structural Annotation: |
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LOC_Os02g33310 |
| Gene Name: |
OsFBD7 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD7 - F-box and FBD domain containing protein |
| GenBank Genomic Acc: |
AP004156 |
| Structural Annotation: |
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LOC_Os02g46690 |
| Gene Name: |
OsFBD8 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD8 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP004118, AP004786 |
| Structural Annotation: |
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LOC_Os04g13160 |
| Gene Name: |
OsFBD9 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD9 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AL606994 |
| Structural Annotation: |
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LOC_Os04g13170 |
| Gene Name: |
OsFBD10 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD10 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AL606994 |
| Structural Annotation: |
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LOC_Os06g29700 |
| Gene Name: |
OsFBD11 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD11 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP003577 |
| Structural Annotation: |
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LOC_Os06g29710 |
| Gene Name: |
OsFBD12 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD12 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP003521 |
| Structural Annotation: |
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LOC_Os07g02760 |
| Gene Name: |
OsFBD13 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD13 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP003810 |
| Structural Annotation: |
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LOC_Os08g35960 |
| Gene Name: |
OsFBD14 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD14 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP005405 |
| Structural Annotation: |
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LOC_Os12g31340 |
| Gene Name: |
OsFBD15 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD15 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AL831808 |
| Structural Annotation: |
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LOC_Os12g37110 |
| Gene Name: |
OsFBD16 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD16 - F-box and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AL928745 |
| Structural Annotation: |
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LOC_Os12g37130 |
| Gene Name: |
OsFBD17 |
| Gene Description: |
F-box and FBD domain containing protein
|
| MSU Annotation: |
OsFBD17 - F-box and FBD domain containing protein |
| GenBank Genomic Acc: |
AL928745 |
| Structural Annotation: |
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