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| Superfamily: |
F-box proteins |
| Contact: |
Jitendra Khurana |
| Organization: |
University of Delhi |
| Website: |
http://genomeindia.org/DPMB/index.htm |
| Source: |
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK,
Khurana JP (2007) F-box proteins in rice. Genome-wide analysis, classification, temporal and
spatial gene expression during panicle and seed development, and regulation by
light and abiotic stress. Plant Physiology 143(4):1467-83 |
| Criteria: |
BLAST search using the Hidden Markov Model (HMM) profile of F-box domain (PF00646) followed by domain analysis using SMART and PFam with an E-value cut off of less than 1.0. The identified 687 proteins were further classified into 10 subfamilies based upon their domain organization as indicated by the subfamily name. |
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LOC_Os02g06520 |
| Gene Name: |
OsFBLD1 |
| Gene Description: |
F-box, LRR and FBD domain containing protein
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| MSU Annotation: |
OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP004843 |
| Structural Annotation: |
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LOC_Os04g33400 |
| Gene Name: |
OsFBLD2 |
| Gene Description: |
F-box, LRR and FBD domain containing protein
|
| MSU Annotation: |
OsFBLD2 - F-box, LRR and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AL731641 |
| Structural Annotation: |
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LOC_Os07g06900 |
| Gene Name: |
OsFBLD3 |
| Gene Description: |
F-box, LRR and FBD domain containing protein
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| MSU Annotation: |
OsFBLD3 - F-box, LRR and FBD domain containing protein |
| GenBank Genomic Acc: |
AP004664 |
| Structural Annotation: |
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LOC_Os07g13900 |
| Gene Name: |
OsFBLD4 |
| Gene Description: |
F-box, LRR and FBD domain containing protein
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| MSU Annotation: |
OsFBLD4 - F-box, LRR and FBD domain containing protein |
| GenBank Genomic Acc: |
AP004382 |
| Structural Annotation: |
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LOC_Os07g18510 |
| Gene Name: |
OsFBLD5 |
| Gene Description: |
F-box, LRR and FBD domain containing protein
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| MSU Annotation: |
OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP005106 |
| Structural Annotation: |
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LOC_Os07g18560 |
| Gene Name: |
OsFBLD6 |
| Gene Description: |
F-box, LRR and FBD domain containing protein
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| MSU Annotation: |
OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP005106 |
| Structural Annotation: |
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LOC_Os07g18610 |
| Gene Name: |
OsFBLD7 |
| Gene Description: |
F-box, LRR and FBD domain containing protein
|
| MSU Annotation: |
OsFBLD7 - F-box, LRR and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP005106 |
| Structural Annotation: |
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LOC_Os07g18710 |
| Gene Name: |
OsFBLD8 |
| Gene Description: |
F-box, LRR and FBD domain containing protein
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| MSU Annotation: |
OsFBLD8 - F-box, LRR and FBD domain containing protein, expressed |
| GenBank Genomic Acc: |
AP004268 |
| Structural Annotation: |
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LOC_Os09g27090 |
| Gene Name: |
OsFBLD9 |
| Gene Description: |
F-box, LRR and FBD domain containing protein
|
| MSU Annotation: |
OsFBLD9 - F-box, LRR and FBD domain containing protein |
| GenBank Genomic Acc: |
AP005419 |
| Structural Annotation: |
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