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| Superfamily: |
F-box proteins |
| Contact: |
Jitendra Khurana |
| Organization: |
University of Delhi |
| Website: |
http://genomeindia.org/DPMB/index.htm |
| Source: |
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK,
Khurana JP (2007) F-box proteins in rice. Genome-wide analysis, classification, temporal and
spatial gene expression during panicle and seed development, and regulation by
light and abiotic stress. Plant Physiology 143(4):1467-83 |
| Criteria: |
BLAST search using the Hidden Markov Model (HMM) profile of F-box domain (PF00646) followed by domain analysis using SMART and PFam with an E-value cut off of less than 1.0. The identified 687 proteins were further classified into 10 subfamilies based upon their domain organization as indicated by the subfamily name. |
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LOC_Os02g10600 |
| Gene Name: |
OsFBA1 |
| Gene Description: |
F-box and FBA domain containing protein
|
| MSU Annotation: |
OsFBA1 - F-box and FBA domain containing protein, expressed |
| GenBank Genomic Acc: |
AP004812 |
| Structural Annotation: |
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LOC_Os07g09870 |
| Gene Name: |
OsFBA2 |
| Gene Description: |
F-box and FBA domain containing protein
|
| MSU Annotation: |
OsFBA2 - F-box and FBA domain containing protein, expressed |
| GenBank Genomic Acc: |
AP004379 |
| Structural Annotation: |
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LOC_Os09g27570 |
| Gene Name: |
OsFBA3 |
| Gene Description: |
F-box and FBA domain containing protein
|
| MSU Annotation: |
OsFBA3 - F-box and FBA domain containing protein, expressed |
| GenBank Genomic Acc: |
AP005575 |
| Structural Annotation: |
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LOC_Os12g30920 |
| Gene Name: |
OsFBA4 |
| Gene Description: |
F-box and FBA domain containing protein
|
| MSU Annotation: |
OsFBA4 - F-box and FBA domain containing protein, expressed |
| GenBank Genomic Acc: |
AL845345 |
| Structural Annotation: |
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