| |
|
| Superfamily: |
Cysteine Rich Peptides |
| Contact: |
Kevin Silverstein |
| Organization: |
University of Minnesota |
| Source: |
Silverstein, K.A.T., Moskal, W.A., Jr., Wu, H., Underwood, B.A., Graham, M.A., Town, C.D, and VandenBosch, K.A. (2007) Small cysteine peptides resembling antimicrobial peptides have been under-predicted in plants. Plant J. 51(2):262-80 |
| Criteria: |
Iterative HMM family-based searches, starting with known cysteine-rich antimicrobial sequences. |
| |
|
Chr10:9870777..9870099 |
| Gene Name: |
DEFL58 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr10:9876034..9875530 |
| Gene Name: |
DEFL59 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Comment: |
TIGR Rice Transcript Assembly TA28648_4530. |
| Structural Annotation: |
|
|
|
| |
|
Chr10:9878571..9878142 |
| Gene Name: |
DEFL60 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Comment: |
Pseudogene. |
| Structural Annotation: |
|
|
|
| |
|
Chr10:9881891..9880832 |
| Gene Name: |
DEFL61 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr10:9888201..9886236 |
| Gene Name: |
DEFL62 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr10:9889949..9889400 |
| Gene Name: |
DEFL63 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr10:9893322..9892779 |
| Gene Name: |
DEFL64 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr10:9898809..9898224 |
| Gene Name: |
DEFL65 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr10:9906885..9906379 |
| Gene Name: |
DEFL66 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr10:9908551..9908131 |
| Gene Name: |
DEFL67 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr10:9921581..9921141 |
| Gene Name: |
DEFL68 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Comment: |
TIGR Rice Transcript Assembly TA28928_4530. |
| Structural Annotation: |
|
|
|
| |
|
Chr11:25145624..25145990 |
| Gene Name: |
DEFL24 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr11:4341755..4342138 |
| Gene Name: |
DEFL23 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr2:23900154..23900559 |
| Gene Name: |
DEFL36 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Comment: |
Pseudogene. |
| Structural Annotation: |
|
|
|
| |
|
Chr2:23900871..23901251 |
| Gene Name: |
DEFL37 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Comment: |
TIGR Rice Transcript Assembly CA760707 |
| Structural Annotation: |
|
|
|
| |
|
Chr2:32783969..32783763 |
| Gene Name: |
DEFL76 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Comment: |
Pseudogene. |
| Structural Annotation: |
|
|
|
| |
|
Chr2:3874595..3875016 |
| Gene Name: |
DEFL19 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr2:3926843..3927216 |
| Gene Name: |
DEFL20 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Comment: |
Rice FL_cDNA AK121438 |
| Structural Annotation: |
|
|
|
| |
|
Chr2:3946042..3946540 |
| Gene Name: |
DEF4 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Comment: |
High confidence supported by TIGR Rice Transcript Assembly TA20887_4530 |
| Structural Annotation: |
|
|
|
| |
|
Chr2:3948759..3949208 |
| Gene Name: |
DEF5 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Comment: |
High confidence supported by TIGR Rice Transcript Assembly TA19636_4530 |
| Structural Annotation: |
|
|
|
| |
|
Chr3:762011..761582 |
| Gene Name: |
DEFL5 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr4:12584805..12584445 |
| Gene Name: |
DEFL77 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr4:6065872..6065254 |
| Gene Name: |
DEF10 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr4:6092310..6091661 |
| Gene Name: |
DEF11 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr5:9294806..9295216 |
| Gene Name: |
DEFL52 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Comment: |
TIGR Rice Transcript assemblies CB097071, CA760767 and CA759130 |
| Structural Annotation: |
|
|
|
| |
|
Chr6:13422790..13423753 |
| Gene Name: |
DEFL10 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Comment: |
Pseudogene and this high-confidence prediction is based upon high similarity to 4 paralogous paralogs (3 are in adjacent positions). |
| Structural Annotation: |
|
|
|
| |
|
Chr6:5924598..5923582 |
| Gene Name: |
DEFL26 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr6:5927880..5926195 |
| Gene Name: |
DEFL39 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Structural Annotation: |
|
|
|
| |
|
Chr8:9432893..9432423 |
| Gene Name: |
DEFL54 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Comment: |
TIGR Rice Transcript Assemblies AU101251 and C73342. |
| Structural Annotation: |
|
|
|
| |
|
Chr8:9487537..9487014 |
| Gene Name: |
DEFL57 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| Comment: |
Pseudogene with support of paralogous sequences. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os01g10550 |
| Gene Name: |
DEFL35 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL35 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os01g40220 |
| Gene Name: |
DEFL7 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL7 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os01g61360 |
| Gene Name: |
DEFL4 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL4 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os01g70680 |
| Gene Name: |
DEF1 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEF1 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g07440 |
| Gene Name: |
DEFL78 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL78 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g07550 |
| Gene Name: |
DEFL1 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL1 - Defensin and Defensin-like DEFL family, expressed |
| Comment: |
The CA annotation fits the alignments of the 11 paralogs. The CA annotation also includes the crucial last cysteine. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g07590 |
| Gene Name: |
DEF2 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEF2 - Defensin and Defensin-like DEFL family |
| Comment: |
Pseudogene and CA annotation includes crucial cysteines after the stop codon in this psuedogene. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g07600 |
| Gene Name: |
DEF3 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEF3 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g12060 |
| Gene Name: |
DEF6 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEF6 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g20130 |
| Gene Name: |
DEFL72 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL72 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g41904 |
| Gene Name: |
DEF7 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEF7 - Defensin and Defensin-like DEFL family |
| Comment: |
Rice FL-cDNA AK121915 and TIGR Rice Transcript Assemblies AU030229, AU058417, and CR279406. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g49540 |
| Gene Name: |
DEFL73 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL73 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g53570 |
| Gene Name: |
DEFL74 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL74 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g53590 |
| Gene Name: |
DEFL71 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL71 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g53600 |
| Gene Name: |
DEFL75 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL75 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g56870 |
| Gene Name: |
DEFL38 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL38 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g03810 |
| Gene Name: |
DEF8 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEF8 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g56682 |
| Gene Name: |
DEFL40 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL40 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g11130 |
| Gene Name: |
DEF9 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEF9 - Defensin and Defensin-like DEFL family, expressed |
| Comment: |
Rice FL-cDNA AK071283 and TIGR Rice Transcript Assemblies AK071283 and C73452. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g15740 |
| Gene Name: |
DEFL50 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL50 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g15760 |
| Gene Name: |
DEFL51 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL51 - Defensin and Defensin-like DEFL family |
| Comment: |
The CA two-exon gene has very strong similarity (8.8e-19) to other known DEFLs and is very close to another gene from the same subclass CRP0520. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g31250 |
| Gene Name: |
DEFL49 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL49 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g44130 |
| Gene Name: |
DEF12 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEF12 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os06g22880 |
| Gene Name: |
DEFL8 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL8 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os06g22919 |
| Gene Name: |
DEFL9 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL9 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os06g23060 |
| Gene Name: |
DEFL11 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL11 - Defensin and Defensin-like DEFL family |
| Comment: |
The CA gene structure fits very well with 3 nearly identical neighboring paralogs in CRP0220. The CA strucutre is supported by TA25281_4530. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os06g45320 |
| Gene Name: |
DEFL27 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL27 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os06g48660 |
| Gene Name: |
DEFL21 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL21 - Defensin and Defensin-like DEFL family, expressed |
| Comment: |
This annotation is supported by orthologs in wheat and barley. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os06g48690 |
| Gene Name: |
DEFL12 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL12 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os07g01700 |
| Gene Name: |
DEFL2 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL2 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os07g41290 |
| Gene Name: |
DEFL13 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL13 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os08g04520 |
| Gene Name: |
DEFL53 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL53 - Defensin and Defensin-like DEFL family |
| Comment: |
CA annotation is supported by 6 paralogs. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os08g15545 |
| Gene Name: |
DEFL55 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL55 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os08g15550 |
| Gene Name: |
DEFL56 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL56 - Defensin and Defensin-like DEFL family |
| Comment: |
The CA annotation is supported by a half dozen highly similar paralogs, many in close proximity. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os09g02160 |
| Gene Name: |
DEFL47 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL47 - Defensin and Defensin-like DEFL family |
| Comment: |
CA annotation has orthologs in other grass species. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os09g11790 |
| Gene Name: |
DEFL14 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL14 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os10g20540 |
| Gene Name: |
DEFL69 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL69 - Defensin and Defensin-like DEFL family |
| Comment: |
The CA annotatoin is fully supported by 6 similar paralogous genes and perfectly matches TIGR Rice Transcript Assembly CX116433. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os10g20550 |
| Gene Name: |
DEFL70 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL70 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os10g20560 |
| Gene Name: |
DEFL81 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL81 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os10g37290 |
| Gene Name: |
DEFL6 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL6 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g08170 |
| Gene Name: |
DEFL45 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL45 - Defensin and Defensin-like DEFL family |
| Comment: |
Community Annotation structure includes the signal peptide. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g08220 |
| Gene Name: |
DEFL28 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL28 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g08230 |
| Gene Name: |
DEFL46 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL46 - Defensin and Defensin-like DEFL family |
| Comment: |
This model includes an internal duplication of the defensin motif. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g08240 |
| Gene Name: |
DEFL29 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL29 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g08250 |
| Gene Name: |
DEFL30 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL30 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g08260 |
| Gene Name: |
DEFL31 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL31 - Defensin and Defensin-like DEFL family |
| Comment: |
The CA single-exon gene is consistent with numerous surrounding paralogous genes in a large defensin cluster. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g08270 |
| Gene Name: |
DEFL22 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL32 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g08270 |
| Gene Name: |
DEFL32 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL32 - Defensin and Defensin-like DEFL family |
| Comment: |
The CA single-exon gene is consistent with numerous surrounding paralogous genes in a large defensin cluster. |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g08280 |
| Gene Name: |
DEFL33 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL33 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g34990 |
| Gene Name: |
DEFL79 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL79 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g39910 |
| Gene Name: |
DEFL80 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL80 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g42520 |
| Gene Name: |
DEFL34 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL34 - Defensin and Defensin-like DEFL family |
| Comment: |
The CA annotation is confirmed by Rice EST Read Pair CI739431 CI521227 and is similar to 8 paralogous genes. |
| Structural Annotation: |
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LOC_Os11g42530 |
| Gene Name: |
DEFL25 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL25 - Defensin and Defensin-like DEFL family |
| Comment: |
The CA annoation fits well with 3 similar paralogs (2 of them adjacent to this gene). |
| Structural Annotation: |
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LOC_Os11g45360 |
| Gene Name: |
DEFL15 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL15 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
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LOC_Os11g47019 |
| Gene Name: |
DEFL41 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL42 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
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LOC_Os11g47019 |
| Gene Name: |
DEFL42 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL42 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
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LOC_Os11g47120 |
| Gene Name: |
DEFL48 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL48 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
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LOC_Os11g47269 |
| Gene Name: |
DEFL44 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL44 - Defensin and Defensin-like DEFL family |
| Comment: |
CA gene structure includes defensin motif. |
| Structural Annotation: |
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LOC_Os12g06750 |
| Gene Name: |
DEFL16 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL16 - Defensin and Defensin-like DEFL family |
| Comment: |
CA gene structure is supported by 6 similar paralogous genes, one of them adjacent to this gene. |
| Structural Annotation: |
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LOC_Os12g06760 |
| Gene Name: |
DEFL17 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL17 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
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LOC_Os12g12220 |
| Gene Name: |
DEFL18 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL18 - Defensin and Defensin-like DEFL family |
| Comment: |
Correction is consistent with gene structure of 6 paralogs, and CA annotation includes the crucial last four cysteines. |
| Structural Annotation: |
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LOC_Os12g12230 |
| Gene Name: |
DEFL43 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL43 - Defensin and Defensin-like DEFL family, expressed |
| Structural Annotation: |
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LOC_Os12g41790 |
| Gene Name: |
DEFL3 |
| Gene Description: |
Defensin and Defensin-like (DEFL) family
|
| MSU Annotation: |
DEFL3 - Defensin and Defensin-like DEFL family |
| Structural Annotation: |
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