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| Superfamily: |
Cysteine Rich Peptides |
| Contact: |
Kevin Silverstein |
| Organization: |
University of Minnesota |
| Source: |
Silverstein, K.A.T., Moskal, W.A., Jr., Wu, H., Underwood, B.A., Graham, M.A., Town, C.D, and VandenBosch, K.A. (2007) Small cysteine peptides resembling antimicrobial peptides have been under-predicted in plants. Plant J. 51(2):262-80 |
| Criteria: |
Iterative HMM family-based searches, starting with known cysteine-rich antimicrobial sequences. |
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LOC_Os01g48049 |
| Gene Name: |
MTN26L1 |
| Gene Description: |
MtN26 family protein precursor
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| MSU Annotation: |
MTN26L1 - MtN26 family protein precursor |
| Comment: |
Pseudogene. Annotated gene is missing key cysteines that appear just upstream in the same exon. Could not find the remaining exons of this likely pseudogene. |
| Structural Annotation: |
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LOC_Os03g06580 |
| Gene Name: |
MTN26L2 |
| Gene Description: |
MtN26 family protein precursor, expressed
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| MSU Annotation: |
MTN26L2 - MtN26 family protein precursor, expressed |
| Structural Annotation: |
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LOC_Os10g28380 |
| Gene Name: |
MTN26L3 |
| Gene Description: |
MtN26 family protein precursor, putative
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| MSU Annotation: |
MTN26L3 - MtN26 family protein precursor, putative |
| Structural Annotation: |
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LOC_Os10g28400 |
| Gene Name: |
MTN26L4 |
| Gene Description: |
MtN26 family protein precursor
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| MSU Annotation: |
MTN26L4 - MtN26 family protein precursor, expressed |
| Comment: |
Pseudogene. High-confidence pseudogene is highly similar to an adjacent paralog plus several paralogs elsewhere. The gene would be intact except that the second canonical donor splice site is lost (it is a 'ct' instead of 'gt', though it appears in precisely the right spot relative to all paralogs). |
| Structural Annotation: |
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LOC_Os11g37210 |
| Gene Name: |
MTN26L5 |
| Gene Description: |
MtN26 family protein precursor
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| MSU Annotation: |
MTN26L5 - MtN26 family protein precursor, expressed |
| Comment: |
This annotation extends across two TIGR loci. This correction is of high confidence due to alignment with close homologs from wheat and other species. |
| Structural Annotation: |
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