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| Contact: |
Teerapong Buaboocha |
| Organization: |
Chulalongkorn University, Bangkok, Thailand |
| Source: |
Bongkoj Boonburapong, Teerapong Buaboocha (2007) Genome-wide identification and analyses of the rice calmodulin and related potential calcium sensor proteins. BMC Plant Biology, 7:4 |
| Criteria: |
The Oryza sativa L. genome was searched against the Interpro database by five different methods including HMMPfam, HMMSmart, BlastProDom, ProfileScan and superfamily to find proteins that contain calcium-binding EF-hand motifs. Calmodulin-related proteins were identified based on amino acid sequence identity with rice CaM1 and CBL3 and phylogenetic analysis based on amino acid sequence alignments by ClustalX. |
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LOC_Os01g04330 |
| Gene Name: |
OsCML16 |
| Gene Description: |
Calmodulin-related calcium sensor protein
|
| MSU Annotation: |
OsCML16 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP003214 |
| Comment: |
AK062711
|
| Structural Annotation: |
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LOC_Os01g32120 |
| Gene Name: |
OsCML11 |
| Gene Description: |
Calmodulin-related calcium sensor protein
|
| MSU Annotation: |
OsCML11 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP003054 |
| Comment: |
AK072726
|
| Structural Annotation: |
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LOC_Os01g41990 |
| Gene Name: |
OsCML12 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML12 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP003022 |
| Comment: |
AK064844
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| Structural Annotation: |
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LOC_Os01g59530 |
| Gene Name: |
OsCML1 |
| Alternate Gene Name: |
OsCam61
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| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML1 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP003260 |
| Mutant Line/Info: |
AG207931 |
| Comment: |
AF231026
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| Structural Annotation: |
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LOC_Os01g72100 |
| Gene Name: |
OsCML10 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML10 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP003735 |
| Comment: |
AK070662
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| Structural Annotation: |
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LOC_Os01g72530 |
| Gene Name: |
OsCML31 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML31 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP004368 |
| Comment: |
AK062671
|
| Structural Annotation: |
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LOC_Os01g72540 |
| Gene Name: |
OsCML23 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML23 - Calmodulin-related calcium sensor protein |
| Structural Annotation: |
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LOC_Os01g72550 |
| Gene Name: |
OsCML19 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML19 - Calmodulin-related calcium sensor protein |
| Structural Annotation: |
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LOC_Os02g39380 |
| Gene Name: |
OsCML17 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML17 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP006438 |
| Comment: |
AK100200
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| Structural Annotation: |
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LOC_Os02g50060 |
| Gene Name: |
OsCML20 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML20 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP005319 |
| Comment: |
AK108506
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| Structural Annotation: |
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LOC_Os03g21380 |
| Gene Name: |
OsCML27 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML27 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AF325719 |
| Comment: |
AK109470
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| Structural Annotation: |
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LOC_Os03g53200 |
| Gene Name: |
OsCML4 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML4 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AC092558 |
| Comment: |
AK067697
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| Structural Annotation: |
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LOC_Os04g41540 |
| Gene Name: |
OsCML22 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML22 - Calmodulin-related calcium sensor protein, expressed |
| Comment: |
AK242428
, CI291642
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| Structural Annotation: |
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LOC_Os05g13580 |
| Gene Name: |
OsCML18 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML18 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AC120985 |
| Comment: |
AK071661
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| Structural Annotation: |
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LOC_Os05g24780 |
| Gene Name: |
OsCML21 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML21 - Calmodulin-related calcium sensor protein, expressed |
| Comment: |
AK243353
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| Structural Annotation: |
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LOC_Os05g31620 |
| Gene Name: |
OsCML15 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML15 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AC136222 |
| Comment: |
AK067214
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| Structural Annotation: |
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LOC_Os05g41200 |
| Gene Name: |
OsCML9 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML9 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AC129718 |
| Comment: |
AK105230
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| Structural Annotation: |
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LOC_Os05g50180 |
| Gene Name: |
OsCML14 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML14 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AC098571 |
| Comment: |
AK119799
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| Structural Annotation: |
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LOC_Os06g07560 |
| Gene Name: |
OsCML30 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML30 - Calmodulin-related calcium sensor protein, expressed |
| Comment: |
AK105920
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| Structural Annotation: |
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LOC_Os06g47640 |
| Gene Name: |
OsCML29 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML29 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP008207 |
| Comment: |
AK070430
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| Structural Annotation: |
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LOC_Os07g42660 |
| Gene Name: |
OsCML13 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML13 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP004309 |
| Comment: |
AK074019
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| Structural Annotation: |
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LOC_Os07g48340 |
| Gene Name: |
OsCML24 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML24 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP005099 |
| Comment: |
AK062850
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| Structural Annotation: |
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LOC_Os08g02420 |
| Gene Name: |
OsCML7 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML7 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP004562 |
| Comment: |
AK059891
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| Structural Annotation: |
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LOC_Os08g04890 |
| Gene Name: |
OsCML32 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML32 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP005506 |
| Comment: |
AK071435
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| Structural Annotation: |
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LOC_Os10g25010 |
| Gene Name: |
OsCML8 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML8 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AC078839 |
| Comment: |
AK065782
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| Structural Annotation: |
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LOC_Os11g01390 |
| Gene Name: |
OsCML25 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML25 - Calmodulin-related calcium sensor protein |
| GenBank Genomic Acc: |
AP008217 |
| Structural Annotation: |
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LOC_Os11g03980 |
| Gene Name: |
OsCML2 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML2 - Calmodulin-related calcium sensor protein |
| GenBank Genomic Acc: |
AP008217 |
| Structural Annotation: |
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LOC_Os11g37550 |
| Gene Name: |
OsCML6 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML6 - Calmodulin-related calcium sensor protein |
| Structural Annotation: |
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LOC_Os12g01400 |
| Gene Name: |
OsCML26 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML26 - Calmodulin-related calcium sensor protein |
| GenBank Genomic Acc: |
AP008218 |
| Comment: |
CI648777
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| Structural Annotation: |
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LOC_Os12g03816 |
| Gene Name: |
OsCML3 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML3 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP008218 |
| Comment: |
AK111834
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| Structural Annotation: |
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LOC_Os12g12730 |
| Gene Name: |
OsCML28 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML28 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AP008218 |
| Comment: |
AK064732
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| Structural Annotation: |
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LOC_Os12g41110 |
| Gene Name: |
OsCML5 |
| Gene Description: |
Calmodulin-related calcium sensor protein
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| MSU Annotation: |
OsCML5 - Calmodulin-related calcium sensor protein, expressed |
| GenBank Genomic Acc: |
AL928781 |
| Comment: |
AB060552
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| Structural Annotation: |
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