| |
|
| Superfamily: |
Bric-A-Brac/Tramtrack/Broad Complex (BTB) Proteins |
| Contact: |
Derek Gingerich |
| Organization: |
University of Wisconsin-Eau Claire |
| Source: |
Gingerich DJ, Hanada K, Shiu SH, Vierstra RD (2007) Large-scale, lineage-specific expansion of a bric-a-brac/tramtrack/broad complex ubiquitin-ligase gene family in rice. Plant Cell 19(8):2329-48
|
| Criteria: |
Annotation is based on the comparison of homologous genes in rice and Arabidopsis and, when available, on full-length cDNAs |
| |
|
LOC_Os01g57230 |
| Gene Name: |
BTBN1 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008207 |
| Comment: |
AK120823
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g35970 |
| Gene Name: |
BTBN2 |
| Alternate Gene Name: |
CPT1
|
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008208 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os02g38120 |
| Gene Name: |
BTBN3 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
|
| MSU Annotation: |
BTBN3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed |
| GenBank Genomic Acc: |
AP008208 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g10800 |
| Gene Name: |
BTBN4 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
|
| MSU Annotation: |
BTBN4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed |
| GenBank Genomic Acc: |
AP008209 |
| Comment: |
AK103674
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g10880 |
| Gene Name: |
BTBN5 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008209 |
| Comment: |
BM420577 BM420733 CB659303 CB643065
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g22600 |
| Gene Name: |
BTBN6 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008209 |
| Comment: |
AK110492
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g41350 |
| Gene Name: |
BTBN7 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
|
| MSU Annotation: |
BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed |
| GenBank Genomic Acc: |
AP008209 |
| Comment: |
AK065981
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g43990 |
| Gene Name: |
BTBN8 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008209 |
| Comment: |
CI607810 CI751411 CI624881
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g52880 |
| Gene Name: |
BTBN9 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008209 |
| Comment: |
CI057298 CI033851 CB640028 CI286283
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os03g55830 |
| Gene Name: |
BTBN10 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008209 |
| Comment: |
AK111226
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g40100 |
| Gene Name: |
BTBN11 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
|
| MSU Annotation: |
BTBN11 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed |
| GenBank Genomic Acc: |
AP008210 |
| Comment: |
AK067981
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g54400 |
| Gene Name: |
BTBN12 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008210 |
| Comment: |
AK109716
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os04g57800 |
| Gene Name: |
BTBN13 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008210 |
| Comment: |
AK059048 AK119773
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os05g11190 |
| Gene Name: |
BTB2 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain
|
| MSU Annotation: |
BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain |
| GenBank Genomic Acc: |
AP008211 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os06g08550 |
| Gene Name: |
BTBN14 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
|
| MSU Annotation: |
BTBN14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed |
| GenBank Genomic Acc: |
AP008212 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os07g36230 |
| Gene Name: |
BTBN15 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN15 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008213 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os07g39530 |
| Gene Name: |
BTBN16 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
|
| MSU Annotation: |
BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed |
| GenBank Genomic Acc: |
AP008213 |
| Comment: |
AK102803
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os08g03650 |
| Gene Name: |
BTBN17 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008214 |
| Comment: |
AK100956
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os09g09370 |
| Gene Name: |
BTBN18 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
|
| MSU Annotation: |
BTBN18 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed |
| GenBank Genomic Acc: |
AP008215 |
| Comment: |
AK110823 CX110239 |
| Structural Annotation: |
|
|
|
| |
|
LOC_Os09g25330 |
| Gene Name: |
BTBN19 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
|
| MSU Annotation: |
BTBN19 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed |
| GenBank Genomic Acc: |
AP008215 |
| Comment: |
AK065475
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g02610 |
| Gene Name: |
BTBN20 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008217 |
| Comment: |
AK119514 AK064985 AK060741
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os11g02620 |
| Gene Name: |
BTBN21 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008217 |
| Comment: |
AK066267
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os12g02530 |
| Gene Name: |
BTBN22 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008218 |
| Comment: |
AK119514 AK064985 AK060741
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os12g02540 |
| Gene Name: |
BTBN23 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN23 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008218 |
| Comment: |
AK066267
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os12g39380 |
| Gene Name: |
BTBN24 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) domain
|
| MSU Annotation: |
BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed |
| GenBank Genomic Acc: |
AP008218 |
| Comment: |
AK071898
|
| Structural Annotation: |
|
|
|
| |
|
LOC_Os12g41910 |
| Gene Name: |
BTBN25 |
| Gene Description: |
Bric-a-Brac, Tramtrack, Broad Complex (BTB) domain with non-phototropic hypocotyl 3 (NPH3) and coiled-coil domains
|
| MSU Annotation: |
BTBN25 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
| GenBank Genomic Acc: |
AP008218 |
| Structural Annotation: |
|
|
|
| |
