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| Contact: |
Fabien Chardon |
| Organization: |
INRA |
| Source: |
Chardon, F., Damerval, C. (2005) Phylogenomic analysis of the PEBP gene family in cereals. Journal of Molecular Evolution. 61:579-590 |
| Criteria: |
RCNs were identified initially as having the PEBP domain (Pfam 01161) and were grouped as a family after phylogenetic analysis. |
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LOC_Os02g32950 |
| Gene Name: |
RCN2 |
| Gene Description: |
Rice Centroradialis-like1 homologous to Arabidopsis TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein
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| MSU Annotation: |
RCN2 Centroradialis-like1 homologous to TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed |
| GenBank Genomic Acc: |
AP005110 |
| Structural Annotation: |
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LOC_Os04g33570 |
| Gene Name: |
RCN4 |
| Gene Description: |
Rice Centroradialis-like1 homologous to Arabidopsis TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein
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| MSU Annotation: |
RCN4 Centroradialis-like1 homologous to TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed |
| GenBank Genomic Acc: |
AL662947 |
| Structural Annotation: |
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LOC_Os11g05470 |
| Gene Name: |
RCN1 |
| Alternate Gene Name: |
FDR2
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| Gene Description: |
Rice Centroradialis-like1 homogous to Arabidopsis TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein
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| MSU Annotation: |
RCN1 Centroradialis-like1 homogous to TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed |
| GenBank Genomic Acc: |
AC116949 |
| GenBank Protein Acc: |
AAD42895 |
| Structural Annotation: |
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LOC_Os12g05590 |
| Gene Name: |
RCN3 |
| Alternate Gene Name: |
FDR1
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| Gene Description: |
Rice Centroradialis-like1 homogous to Arabidopsis TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein
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| MSU Annotation: |
RCN3 Centroradialis-like1 homogous to TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed |
| GenBank Genomic Acc: |
AL929350 |
| GenBank Protein Acc: |
AAD42896 |
| Structural Annotation: |
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1 Nakagawa, M.m Shimamoto, K., Kyozuka, J. (2002) Overexpression of RCN1 and RCN2, rice TERMINAL FLOWER 1/CENTRORADIALIS homologues, confers delay of phase transition and altered panicle morphology in rice. Plant Journal. 29:743-750.
2 Izawa, T., Takahashi, Y., Yano, M. (2003) Comparative biology comes into bloom: genomic and genetic comparison of flowering pathways in rice and Arabidopsis. Current Opinion in Plant Biology. 6:113-120.
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